Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805937.1_cds_XP_016494147.1_8587
CDS Infomation

[gene=LOC107813391] [db_xref=GeneID:107813391] [protein=conserved oligomeric Golgi complex subunit 1-like] [protein_id=XP_016494147.1] [location=join(5315..7540,8637..8831,10875..11155,17928..18107,18395..18572,27308..27445)] [gbkey=CDS]
Sequence

ATGAGGGTAGTGACACCTACATCCCAATCACCCGCCGATCAAAACCGCCTTAGCTCTACC
CCCGTGGCCAGAAACCAAGATGCTGAATTACTCTTCCGCACAAAGCCAATTGCCGAAATC
CGAAATGTGGAAGCCGCCACCAGAAAACAGATCCAAGACAAGAGCGAAGAGCTCCGTCAA
CTCGTCGGCAATCGTTATCGCGATCTAATCGATTCCGCCGATTCCATTGTTCTAATGAAA
TCCTCGTGCGAGTCTATTTCTGCCAATATTGCCGCGATACACCACGGCATTCTTCATTCT
CTTTCTTCCACCGTCGCTGCCGGTTCCCCTAAGTCCATTGCCTCTTCTGACCCTGCAAAA
GCTCGAATTTACGGTATTGCCTGTCGGGTTAAGTATCTTGTTGATACGCCGGAGAATATC
TGGGGCTGTCTCGATGAATCAATGTTTCTAGAATCTTCTGCTCGCTATGCTCGTGCTAAA
CACGTTCACCATAGCTTGAATGAAAATAAGGATCACAAAAGTGTGCTTTCGAAATTTCCG
TTGCTTCAGCATCAATGGCAGGTCGTGGAAAGTTTTAAATTTCAGATCTCCCAGAGAAGC
AGAGAGAGATTGTTGGATCAGGAACTTGGCCTCGGGATAAAAGCTTATGCGGATGCTCTA
GCTGCAGTTGCTGTCATTGATGAGCTTGATCCCAAACAGGTTCTAACATTGTTCCTTGAT
TCGCGGAAATCTTGTATTTCTCAGAAACTAAATGCATGTTCCAATGTTAATGCTACTAGT
TCTGATGTGATTTTAGTTTATTGTGAAGCGTTAAAGATTATTCAGGTTACTGTGGGACAA
GTAGGAGAATTATTCTTGCAAGTATTGAATGATATGCCTTTGTTTTATAAGACTGTATTG
GGTTCACCTCCTGCCTCTCAATTGTTTGGTGGAATACCTAATCCGGATGAGGAAGTGAGG
TTGTGGAACTCTTTTAGAGATGATTTGGAATCGCAAATGGTAATGTTGGATAGGGATTTC
GTTTCCAAGGTATGTTCAGATTGGCTGAGGAATTGTGCCAAGGACATCATGAACAAGATC
AATGGTAAATACTTGATTGGTGTTATCAGCAGTGGGAAAGATCTTGCATTTGCTGAGACA
TTGATACGGGAAACTATGGAAAATAAACAGGTTTTGGAAGGGAGCTTGGAGTGGCTTAAG
AGTGTTTTTGGGTCAGAAATTGAGTTGCCGTGGAAGAGAATACACGAGCTAGTCCTGGGA
GGTGATTCGGACCTATGGGATGAGATATTTGAAGTTGCTTTCGTTAGAAGGATGAAAGCA
ATTATTGATAAAGGATTTGATGAGTTGAGTGGATTAGTTGATGTTGTAGTGTCAGTGGGG
GTCATCTCAGGAACTCCTGGTGAGCAGGTCAATTTCCAGGCGTACTTGAATAGATCTTTA
AATGGTGGAGGTGTTTGGTTCATGGAGCCAAATGGTAAAAAGGTTACCGCCATTCCTGGT
GCGAAGTCACAGCAGCCTGAGGAGAATGATTTTCGCAGTTGTCTCACTGCTTACTTTGGG
GATGAAGTCAGCAGGATAAGAGATGCCGTGGACAGCTGCTGTGAGAGTGTTCTAAAAGAC
CTACTAAGCTTCTTGGAGTCTCCCAAGGCATCCTTGAGACTGAAAGATATGGCCCCATAT
TTACAAAATAAATGTTACCTAAGTATGTCTGCTATACTAATGGAACTGAAGAGCGAGTTG
GATGCATTGTCTGCTAACCTTCAAAACAAAAACCCAAAAGATGAGTCAGTGCCATCGCCT
GCTATACTTGTTGAGAGGTCACTATTTATAGGGCGGCTTTTGTTTGCATTCCAAAAGCAT
TCCAGACACATTCCTGTCATACTTGGTTCACCAAGGTCATGGGTGAGTGAAACTAGAGGG
GCTGGCTCGCCTAGGACCCCAGTTCTACAAAGGTACTCTATGCCACCCATCGACTCCCCG
ACCTCTGAAGGTCCTGGAAAGACAATGTTTGATTCACCTAGAAGACAAAGTTCGATGGCA
TCTGCTGCTTTGTTCGGAGTGGATGACAGTTCTAGCCCACAACTTGAAGAGCTAAGTAAA
ATGACCCAAGATCTTTGCATCAGAGCTTATAATATGTGGATATCTTGGGTTTCTGATGAA
CTTTCAGTTATCTTATCCCAAAATCTCAAACAAGATGATGCCTTGTTTGTAACAACAGCC
TTGAGAGGCTGGGAGGAGACCATTGTTAAGCAAGATCAGTTAAATGAAGGCCAGTCAGAG
ATGAAGATATTGCTTCCTTCTATGCCTTCTTTGTACATAACCTCGTTTCTATTCCAAGCT
TGTGAAGAAATTCAGCGAGTAGGTGGACATGTGCTCGATAAACCTATTCTGAAAAACTTT
GCCTCAAGACTGTTAGATAAGGTGATTCATATTTATGGAGACTTCCTTTCCAGTCAAGAA
ACTCAGGGATCTCTGATTTCAGAGAAAGGAGTGTTGCAAGTTTTATTGGATCTAAGATTT
GCTTCAGATATTCTCTCTGGTGGTGATTCTAATGCAAATGAGGAGTCATTGAAAATGCTT
AAAATGAAGCATCCTTTTAGAAGAAAGCACGATGTACAACTAAGTAAGTCAGTAACTGAA
GAGCGTGTCAATGGGTTGATAAGTAGCTTTGCACAGAGACTGGATCCTATTGATTGGCTC
ACCTATGAGCCATATCTTTGGGAGAATGAGAGGCAGTCATACCTGAGGCATGCTGTGCTC
CTTGGGTTTTTTGTACAGCTTAACCGGATGTACACAGACACTGCCCAGAAACTGCCAACC
AATTCAGAATCAAACATCCTGCGCTGCTCCACAGTACCTCGCTTCAAATATCTCCCCATC
AGTGCCCCAGCACTGTCTTCGAGGGGGACAACCAAGGCATCAATCTCAGCATCTATTGAT
GATGTTTCATCGAGAAGTCCCTGGAAAGGTTACACGAATGACGAGCTGTCTCGAAAGGTT
GACATCGATGAAAATTCAACTTCTGGGATAACAGCGCCATTTTTGAAATCATTTATGCAG
GTTGGCAGCAAATTTGGAGAGAGCACGCTGAAACTGGGATCAATACTAACCGATGGACAA
GTGGGCAGGTTTGGTGACATATTACCTGTTCAAGCTGCAGGCCTTCATTCCTTCTTCACA
GCTGCCAGATCAGAGTAA

Peptide Sequence

PEP ID

XP_016494147.1
PEP Infomation

PREDICTED: conserved oligomeric Golgi complex subunit 1-like [Nicotiana tabacum]
Sequence

MRVVTPTSQSPADQNRLSSTPVARNQDAELLFRTKPIAEIRNVEAATRKQIQDKSEELRQ
LVGNRYRDLIDSADSIVLMKSSCESISANIAAIHHGILHSLSSTVAAGSPKSIASSDPAK
ARIYGIACRVKYLVDTPENIWGCLDESMFLESSARYARAKHVHHSLNENKDHKSVLSKFP
LLQHQWQVVESFKFQISQRSRERLLDQELGLGIKAYADALAAVAVIDELDPKQVLTLFLD
SRKSCISQKLNACSNVNATSSDVILVYCEALKIIQVTVGQVGELFLQVLNDMPLFYKTVL
GSPPASQLFGGIPNPDEEVRLWNSFRDDLESQMVMLDRDFVSKVCSDWLRNCAKDIMNKI
NGKYLIGVISSGKDLAFAETLIRETMENKQVLEGSLEWLKSVFGSEIELPWKRIHELVLG
GDSDLWDEIFEVAFVRRMKAIIDKGFDELSGLVDVVVSVGVISGTPGEQVNFQAYLNRSL
NGGGVWFMEPNGKKVTAIPGAKSQQPEENDFRSCLTAYFGDEVSRIRDAVDSCCESVLKD
LLSFLESPKASLRLKDMAPYLQNKCYLSMSAILMELKSELDALSANLQNKNPKDESVPSP
AILVERSLFIGRLLFAFQKHSRHIPVILGSPRSWVSETRGAGSPRTPVLQRYSMPPIDSP
TSEGPGKTMFDSPRRQSSMASAALFGVDDSSSPQLEELSKMTQDLCIRAYNMWISWVSDE
LSVILSQNLKQDDALFVTTALRGWEETIVKQDQLNEGQSEMKILLPSMPSLYITSFLFQA
CEEIQRVGGHVLDKPILKNFASRLLDKVIHIYGDFLSSQETQGSLISEKGVLQVLLDLRF
ASDILSGGDSNANEESLKMLKMKHPFRRKHDVQLSKSVTEERVNGLISSFAQRLDPIDWL
TYEPYLWENERQSYLRHAVLLGFFVQLNRMYTDTAQKLPTNSESNILRCSTVPRFKYLPI
SAPALSSRGTTKASISASIDDVSSRSPWKGYTNDELSRKVDIDENSTSGITAPFLKSFMQ
VGSKFGESTLKLGSILTDGQVGRFGDILPVQAAGLHSFFTAARSE

Transcript Sequence

Gene sequence data has not been registered.